BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F08LP1|AL429605
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig955 1027 0.0
3x_Contig89 404 e-112
>3x_Contig955
Length = 4159
Score = 1027 bits (518), Expect = 0.0
Identities = 521/522 (99%)
Strand = Plus / Minus
Query: 317 tgttcgaatatacacacatgcgtgctatcaaaatctggttcaatcaaatcttggggatta 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 tgttcgaatatacacacatgcgtgctatcaaaatctggttcaatcaaatcttggggatta 4085
Query: 377 gacgttggtcaatttggatctactagtaaattcaaaaaagagaccccttatctcgatcaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4084 gacgttggtcaatttggatctactagtaaattcaaaaaagagaccccttatctcgatcaa 4025
Query: 437 aaaggacaaatttcgccacaaccagttacctcgtttttaccagctgatataaacgagccg 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4024 aaaggacaaatttcgccacaaccagttacctcgtttttaccagctgatataaacgagccg 3965
Query: 497 actgttcttgtctgttcagacctcgttacttttattttatgcggtggaaatcgactattt 556
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3964 actgttcttgtctgtacagacctcgttacttttattttatgcggtggaaatcgactattt 3905
Query: 557 gcgcttacgaattatagaatattgacagttaaaacgacaccttcactgcacgattctttc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3904 gcgcttacgaattatagaatattgacagttaaaacgacaccttcactgcacgattctttc 3845
Query: 617 gacaagtttttcagtcgaaaatttcatgatcatcaaatagttgatatcaaatgcaaagac 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3844 gacaagtttttcagtcgaaaatttcatgatcatcaaatagttgatatcaaatgcaaagac 3785
Query: 677 tcacatggtaaaaacctgatgttactctatgatgacggtaccgttgcttgtattccggat 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3784 tcacatggtaaaaacctgatgttactctatgatgacggtaccgttgcttgtattccggat 3725
Query: 737 ttcaaaaagtcacctataccacaatgtttctggaggccgaagtactcctgggataagtgt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3724 ttcaaaaagtcacctataccacaatgtttctggaggccgaagtactcctgggataagtgt 3665
Query: 797 atatctttcgatataggcagtgctgggcagcttattgtttta 838
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3664 atatctttcgatataggcagtgctgggcagcttattgtttta 3623
>3x_Contig89
Length = 784
Score = 404 bits (204), Expect = e-112
Identities = 255/272 (93%)
Strand = Plus / Plus
Query: 10 caaatactactctctgttattgatggtagacaaggatggaacaaattcagcatacatcac 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caaatactactctctgttattgatggtagacaaggatggaacaaattcagcatacatcac 456
Query: 70 tggccgttctacgaaattaaatttgtttggaaaaagagatctcttcaggtatgtaaaatt 129
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 457 tggccgttctacgaaattaaatttgtttggaaaaagagatctcttcatgtatgtaaaatg 516
Query: 130 ctctgacaagaaattacaagatatcaagtgctccaatcatcatataattgccaaaacaac 189
|||| |||| ||||||||| ||||||| | ||||||||||||||| ||| ||||||||||
Sbjct: 517 ctcttacaataaattacaatatatcaatttctccaatcatcatattatttccaaaacaac 576
Query: 190 caatggaaatatacttttatgggggtccaataaatatggtcaattgggtttaaaccctaa 249
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||
Sbjct: 577 caatggaaatatacttttatgggggtaaaataaatatggtaaattgggtttaaacccgaa 636
Query: 250 aaccaccgagttttcagatcaacccaattcaa 281
||||||| | ||||| |||||||||||||||
Sbjct: 637 aaccacctatgtttcatatcaacccaattcaa 668
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6592
Number of Sequences: 1807
Number of extensions: 6592
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 2
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)